CDS
| Accession Number | TCMCG017C15661 |
| gbkey | CDS |
| Protein Id | OMO92357.1 |
| Location | complement(join(123113..123722,124251..124340,125304..125632,125804..125912,126087..126619,126704..126902,127007..127131,127216..127299,127386..127514,127786..127914,128522..128668,128766..129003,129093..129217)) |
| GeneID | InterPro:IPR000504 |
| Organism | Corchorus olitorius |
| locus_tag | COLO4_17667 |
Protein
| Length | 948aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215141, BioSample:SAMN03160584 |
| db_source | AWUE01016374.1 |
| Definition | hypothetical protein COLO4_17667 [Corchorus olitorius] |
| Locus_tag | COLO4_17667 |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03012 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03253
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03013
[VIEW IN KEGG] map03013 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005852 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGACCGAAGTGATGTTAATGAACGAGATAGAGGCGACGGCGGCTCGCCTCGGCATCGATCTCGATAACATTGATTATAGCTCCATCCAGCTTCCTCCAGGAGAAAACTTTGGCATCATTAGTGATGACGAGGATGTTTACAATGATGATCAACAAGAGATGGACTCCGGGTTCGGAAACATTATTGTGGTCGATAACCTCCCAGTTGTTCCTCGTGAAAAGTTTGAGAAACTGGAGGGAGTCATTAGGAAAATCTATAGTCAGATTGGTGTGATTAAGGAGGATGGGCTTTGGATGCCCCTTGATCCTGAGACTCAAAAAACATTGGGATACTGCTTCATCGAGTATAACACTCCTCAGGAAGCTGAGCTTGCTAAGGAGAGAACCAATTTGTACAAGTTGGACAGAGCACATATTTTTGCTGTTAATATGTTTGATGATTTTGATAAGTTCATGAAAGTTCCCGATGAATGGGCTCCTCCAGAGATAAAACCCTACACACCAGGGGAGAATCTTCAAAAGTGGCTTACTGATGAAAAGGCACGGGATCAATTTGTAATTCGTGCTGGCAATGAAACTGAGATTCTATGGAATGATGCAAGGCAGTCTAAAGCTGAGCTTGTTTACCAGCGACCTTACTGGACAGATAGTTATGTGCAGTGGTCTCCCCTAGGAACATACTTGGCTACAGTTCACAGGCAAGGAGCTGCAGTTTGGGGAGGTGCTGATTCGTTTAATCGCTTAATGCGTTATTCCCACCCTCAGGTTAAGCTTATTGATTTTTCTCCTGGTGAAAAATATTTGGTGACCTATAGCAGCCATGAACCAAGCAATCCTCGTGATGCAAATAGGGTTGTTATAAACATTTTTGACGTAAGAACTGGGAAATCAAGGAGAGATTTTAAGGGAAGTGCAGATGATTTTGCTATTGGAGGAACTGGTGGTGTTGCAGGAGTTTCTTGGCCTATTTTCAGATGGGGAGGAGGAAGAGAGGACAAGTACTTTGCTAAACTTGGGAAGAATATGATATCTGTTTATGAAACAGAAACCTTTAGCCTTATCGACAAGAAATCTTTGAAGGTTGAAAATGTTGTGGACTTTAGTTGGTCACCAACAGATCCAATTATTGCTCTTTTTGTTCCTGAGCTTGGAGGAGGAAACCAACCTGCTAGGGTGAGTCTTGTTCAAATCCCCAGTAAAGAGGAGTTAAGGCAAAAGAATCTTTTCAGTGTTAGTGATTGCAAAATGTACTGGCAAAGCAACGGTGATTATCTTGCTGTCAAGGCTGATCGCTATACAAAAACAAAGAAAAGCACATATACAGGCTTCGAACTCTTCCGCATCAAAGAAAGGGACATTCCAATTGAGGTTTTGGAGCTTGATAATAAAAATGACAAGATAATTGCCTTTGCTTGGGAGCCCAAGGGTCATAGGTTCGCTGTCATACATGGTGATAACCCAAGGCCTGATATAAGCTTTTACTCAATGCGAACTGCCCATAATACGGGCCGAGTTTCAAAGCTCACTACTCTTAAGGGCAAGCAGGCAAATGCTCTATTCTGGTCACCTGCGGGCCGTTTCATAGTTCTTGCTGGATTGAAGGGTTTCAATGGTCAGTTGGAATTCTTCAATGTTGATGAGCTTGAGACTATGGCGACTGCTGAACATTTTATGGCAACAGATATTGAGTGGGATCCCACTGGAAGGTATGTTGCAACAGCAGTGACTTCTGTTCATGAAATGGAAAATGGTTTCAACATATGGTCATTCAATGGCAAGCTGCTTTATCGGATACTGAAGGATCATTTCTTCCAGTTCTTGTGGCGCCCAAGGCCACCATCCTTCTTGACTCCTGAGAAGGAGGATGAGATTGCAAGGAACTTAAAGAAGTATAGTAAGAAGTACGAGGCAGAGGATCAAGATGTCTCAATGCTATTGAGTGAACAAGATCGTGAGAAGAGAAGGATGTTGAAGGAAGAGTGGGAAAAATGGGTGAGTGAATGGAAGAGGGCCCATGAGGAGGAAAAAATGGAGAGGCAAAAGTTGAGGGATGGAGAAGCTAGTGATGAGGAAGAAGAGTACGAAGCTAAAGAAGTTGAGGTAGAGGAACTCTTGGATGTCTCAGAAGAGGTCCTATATGAAGAGCATGCTATTGATCGCAGCTCTGGTGGCTTAGTTGGCATTAACATCGAGTATTTTGGTACGGATGACCTTCTCATCTACATCGCTGAGAGAGCAAGTCAACTCAGACGCCTTCAACTGGCATGTTGCTATGATATTTCAAATGAGGGATTGAGTGAAGCAGTTTCAAAGTTACCATTGCTGGAAGAGCTCGAAATTTATGTTAGCCACACCTACAAAGATGCTATAGAAGCTGTTGTGCGTTGTTGCCCTCTTCTGAAAACATTAAAATATAATCAACAGGGCATCAGAGATGCTTCTTATCGTGATGATGAGGAGGCACTAGCTATTGCACAAAACATGCCAGGATTACACCACCTCCGACTTATTGGAAATCGTTTGACAAATCATGGCTTGCAGGCCATTCTTGATGGGTGCCCTCACCTTGAATCTCTTGACCTGCGCAAGTGTTTCCATGTTAATTTGGAAGGGGATTTGGGAAAAAGATGTGCTCAACAGATCAAAAATTTGAGACGCCCCAATGATTCAACTCATGACTATAAATTCATTGCTGAAGTTGGTGATTCTGGATATCCTTTTGACGAGTTTGACGAGTCTGACTTGATTGATGGTGATTATGAATCCATGTTAAACGACTTTGGTGGTTATGATGGCTTTGATGGTTATGATAGTGATCTGAATCCATATTGGAGCGATTCATGA |
| Protein: MATEVMLMNEIEATAARLGIDLDNIDYSSIQLPPGENFGIISDDEDVYNDDQQEMDSGFGNIIVVDNLPVVPREKFEKLEGVIRKIYSQIGVIKEDGLWMPLDPETQKTLGYCFIEYNTPQEAELAKERTNLYKLDRAHIFAVNMFDDFDKFMKVPDEWAPPEIKPYTPGENLQKWLTDEKARDQFVIRAGNETEILWNDARQSKAELVYQRPYWTDSYVQWSPLGTYLATVHRQGAAVWGGADSFNRLMRYSHPQVKLIDFSPGEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKSRRDFKGSADDFAIGGTGGVAGVSWPIFRWGGGREDKYFAKLGKNMISVYETETFSLIDKKSLKVENVVDFSWSPTDPIIALFVPELGGGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVKADRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDNPRPDISFYSMRTAHNTGRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGFNGQLEFFNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRILKDHFFQFLWRPRPPSFLTPEKEDEIARNLKKYSKKYEAEDQDVSMLLSEQDREKRRMLKEEWEKWVSEWKRAHEEEKMERQKLRDGEASDEEEEYEAKEVEVEELLDVSEEVLYEEHAIDRSSGGLVGINIEYFGTDDLLIYIAERASQLRRLQLACCYDISNEGLSEAVSKLPLLEELEIYVSHTYKDAIEAVVRCCPLLKTLKYNQQGIRDASYRDDEEALAIAQNMPGLHHLRLIGNRLTNHGLQAILDGCPHLESLDLRKCFHVNLEGDLGKRCAQQIKNLRRPNDSTHDYKFIAEVGDSGYPFDEFDESDLIDGDYESMLNDFGGYDGFDGYDSDLNPYWSDS |